PUBLICATIONS

  • Cureton, J C, P. Deaton, D. Lam, E.C. Marsh-Matthews, P.C. Reneau and R.E. Broughton. Rapid divergence of recently isolated populations of a spring-dwelling fish (Gambusia geiseri, Poeciliidae). Submitted, Molecular Ecology.
  • Zhang, F and R E Broughton. 2013. Mito-nuclear Interactions: Compensatory Evolution or Relaxed Selection? Variable Substitution Rates of Vertebrate Oxidative Phosphorylation Genes. Genome Biology and Evolution, doi: 10.1093/gbe/evt129.
  • Zhang, F and R E Broughton. Positive selection and functional constraint correlate with swimming performance in fish mitochondrial OXPHOS genes. Submitted, Molecular Biology and Evolution.
  • Broughton, RE, R Betancur, C Li, G Arratia and G Ortí. 2013. Multilocus phylogenetic analysis reveals the pattern and tempo of bony fish evolution. Plos Currents –Tree of Life, doi: 10.1371/currents.tol.2ca8041495ffafd0c92756e75247483e.
  • Betancur, R., R E Broughton, E O Wiley, K Carpenter, J A López, C Li, N Holcroft, D. Arcila, M Sanciangco, J C Cureton, F Zhang, T Buser, M Campbell, J Ballesteros, A Roa-Varon, S Willis, W C Borden, T Rowley, P Reneau, D Hough, G Lu, T Grande, G Arratia, and G Ortí. 2013. The tree of life and a new classification of bony fishes. Plos Currents – Tree of Life, doi: 10.1371/currents.tol.53ba26640df0ccaee75bb165c8c26288.
  • Gillette, D.P., A.M. Fortner, N.R. Franssen, S. Cartwright, C.M. Tobler, J.S. Wesner, P.C. Reneau, F.H. Reneau, I. Schlupp, E.C. Marsh-Matthews, W.J. Matthews, R.E. Broughton and C.W. Lee. 2012. Patterns of change over time in darter (Teleostei: Percidae) assemblages of the Arkansas River basin, northeastern Oklahoma, USA. Ecography 35:855-864.
  • Broughton, R.E., K.C. Vedala, T.M. Crowl and L.L. Ritterhouse. 2011. Current and historical hybridization with differential introgression among three species of cyprinid fishes (genus Cyprinella). Genetica 139:699-707.
  • Broughton, R.E. 2010. Phylogeny of teleosts based on mitochondrial genome sequences. Pp. 61-76 in Origin and phylogenetic interrelationships of teleosts honoring Gloria Arratia, J.S. Nelson, H.-P. Schultze and M.V.H. Wilson (eds.). Munchen, Verlag Dr. Friedrich Pfeil.
  • Richter, S.C., B.I. Crother, and R.E. Broughton. 2009. Genetic consequences of population reduction and geographic isolation in the critically endangered frog, Rana sevosa. Copeia 2009: 799-806.
  • Turner, T.F., T.E. Dowling, M.J. Osborne, M.V. McPhee, R.E. Broughton, and J.R. Gold. 2009. Microsatellite markers for the endangered razorback sucker, Xyrauchen texanus, are widely applicable to genetic studies of other catostomine fishes. Conservation Genetics 10: 551-553.
  • Wellborn, G.A., and R.E. Broughton. 2008. Diversification on an ecologically constrained adaptive landscape. Molecular Ecology 17:2927–2936.
  • Kjer, K.M., Z. Swingonova, J. LaPolla, and R.E. Broughton. 2007. Why weight? Molecular Phylogenetics and Evolution 43: 999-1004.
  • Broughton, R.E. and P.C. Reneau. 2006. Spatial covariation of mutation and nonsynonymous substitution rates in vertebrate mitochondrial genomes. Molecular Biology and Evolution 28: 1516-1524.
  • Renshaw, M.A., E. Saillant, R.E. Broughton, and J.R. Gold. 2006. Application of hypervariable genetic markers to forensic identification of ‘wild’ from hatchery-raised red drum, Sciaenops ocellatus. Forensic Science International 156: 9-15.
  • Steinauer, M.L., B.B. Nickol, R.E. Broughton, and G. Orti. 2005. First sequenced mitochondrial genome of an acanthocephalan parasite. Journal of Molecular Evolution 60: 706-715.
  • Richter, S.C. and R.E. Broughton. 2005. Variable microsatellite loci developed for the endangered gopher frog, Rana sevosa, and related frogs, Rana areolata and Rana capito. Molecular Ecology Notes 5: 436-438.
  • Gold, J. R., M. A. Renshaw, E. Saillant, K. Cizdziel, and R. E. Broughton. 2004. Genetic identification of fish harvested from offshore aquaculture: an example involving red drum, Sciaenops ocellatus, from the northern Gulf of Mexico. Pp. 71-93 in Efforts to Develop a Responsible Offshore Aquaculture Industry in the Gulf of Mexico: A Compendium of Offshore Aquaculture Consortium Research, C. J. Bridger (ed.). Mississippi-Alabama Sea Grant Consortium, Ocean Springs, MS.
  • Turner, T.F., T.E. Dowling, R.E. Broughton, and J.R.Gold. 2004. Variable microsatellite markers amplify across divergent lineages of cyprinid fishes (subfamily Leusicinae). Conservation Genetics 5: 279-281.
  • Broughton, R.E., and R.G. Harrison. 2003. Nuclear gene genealogies reveal historical, demographic, and selective factors associated with speciation in field crickets. Genetics 163: 1389-1401.
  • Broughton, R.E., L.B. Stewart and J.R. Gold. 2002. Microsatellite loci reveal substantial gene flow among Gulf of Mexico and Atlantic Ocean populations of king mackerel (Scomberomorus cavalla). Fisheries Research 54: 305-316.
  • Broughton, R.E., J.E. Milam, and B.A. Roe. 2001. The complete sequence of the zebrafish (Danio rerio) mitochondrial genome and evolutionary patterns in vertebrate mitochondrial DNA. Genome Research 11: 1958-1967.
  • Broughton, R.E., S.E. Stanley, and R.T. Durrett. 2000. Quantification of homoplasy for nucleotide transitions and transversions and a re-examination of assumptions in weighted phylogenetic analysis. Systematic Biology 49: 617-627.
  • Broughton, R.E., and J.R. Gold. 2000. Phylogenetic relationships in the North American cyprinid genus Cyprinella (Actinopterygii: Cyprinidae) based on mitochondrial ND2 and ND4L gene sequences. Copeia 2000: 1-10.
  • Broughton, R.E., G.J.P. Naylor and T.E. Dowling. 1998. Conflicting phylogenetic patterns caused by molecular mechanisms in mitochondrial DNA sequences. Systematic Biology 47: 696-701.
  • Broughton, R.E., and T.E. Dowling. 1997. Evolutionary dynamics of tandem repeats in the mitochondrial DNA control region of the minnow Cyprinella spiloptera. Molecular Biology and Evolution 14: 1187-1196.
  • Broughton, R.E., and J.R. Gold. 1997. Microsatellite development and survey of variation in northern bluefin tuna (Thunnus thynus). Molecular Marine Biology and Biotechnology 6: 309-314.
  • Dowling, T.E., R.E. Broughton, and B.D. DeMarais. 1997. Significant role for historical effects in the evolution of reproductive isolation: evidence from patterns of introgression between the cyprinid fishes, Luxilus cornutus and Luxilus chrysocephalus. Evolution 51: 1574-1583.
  • Broughton, R.E. 1995. Mitochondrial DNA variation within and among three species of termites in the genus Zootermopsis (Isoptera: Termopsidae). Annals Entomological Society America 88:120-128.
  • Broughton, R.E., and T.E. Dowling. 1994. Length variation in mitochondrial DNA of the minnow Cyprinella spiloptera. Genetics 138: 179-190.
  • Broughton, R.E., and J.K. Grace. 1994. Lack of mitochondrial DNA variation in an introduced population of the Formosan subterranean termite (Isoptera: Rhinotermitidae). Sociobiology 24: 121-126.
  • Broughton, R.E., and D.H. Kistner. 1991. A DNA hybridization study of the termite genus Zootermopsis (Isoptera, Termopsidae). Sociobiology 19: 15-40.

Blue Fin Tuna
Oklahoma Stream

Etheostoma
Spring at Monsanto Well